Sacquin-Mora, Sophie: search on Z-Library

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1

Mobility and Core-Protein Binding Patterns of Disordered C-Terminal Tails in β-Tubulin Isotypes

Laurin, Yoann, Eyer, Joel, Robert, Charles H., Prevost, Chantal, Sacquin-Mora, Sophie

Journal:

Year:

2017

Language:

english

File:

PDF, 6.35 MB

english, 2017

2

Docking Peptides on Proteins: How to Open a Lock, in the Dark, with a Flexible Key

Sacquin-Mora, Sophie, Prévost, Chantal

Journal:

Year:

2015

Language:

english

File:

PDF, 160 KB

english, 2015

3

Controlling Redox Enzyme Orientation at Planar Electrodes

Hitaishi, Vivek, Clement, Romain, Bourassin, Nicolas, Baaden, Marc, de Poulpiquet, Anne, Sacquin-Mora, Sophie, Ciaccafava, Alexandre, Lojou, Elisabeth

Journal:

Year:

2018

Language:

english

File:

PDF, 6.42 MB

english, 2018

4

Identification of Protein Interaction Partners and Protein–Protein Interaction Sites

Sophie Sacquin-Mora, Alessandra Carbone, Richard Lavery

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.70 MB

english, 2008

5

Fold and flexibility: what can proteins' mechanical properties tell us about their folding nucleus?

Sacquin-Mora, Sophie

Journal:

Journal of The Royal Society Interface

Year:

2015

Language:

english

File:

PDF, 1.02 MB

english, 2015

6

Hidden partners: Using cross-docking calculations to predict binding sites for proteins with multiple interactions

Lagarde, Nathalie, Carbone, Alessandra, Sacquin-Mora, Sophie

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.59 MB

english, 2018

7

Probing the Flexibility of the Bacterial Reaction Center: The Wild-Type Protein Is More Rigid Than Two Site-Specific Mutants

Sacquin-Mora, Sophie, Sebban, Pierre, Derrien, Valérie, Frick, Bernhard, Lavery, Richard, Alba-Simionesco, Christiane

Journal:

Year:

2007

Language:

english

File:

PDF, 376 KB

english, 2007

8

Conformational stability adaptation of a double-stranded RNA binding domain to transfer RNA ligand

Bou-nader, Charles, Pecqueur, Ludovic, Barraud, Pierre, Fontecave, Marc, Tisne, Carine, Sacquin-Mora, Sophie, Hamdane, Djemel

Journal:

Year:

2019

Language:

english

File:

PDF, 1.04 MB

english, 2019

9

Modeling the Mechanical Response of Proteins to Anisotropic Deformation

Sophie Sacquin-Mora, Richard Lavery

Journal:

Year:

2009

Language:

english

File:

PDF, 378 KB

english, 2009

10

Functional Modes and Residue Flexibility Control the Anisotropic Response of Guanylate Kinase to Mechanical Stress

Sacquin-Mora, Sophie, Delalande, Olivier, Baaden, Marc

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 699 KB

english, 2010

11

Investigating the Structural Variability and Binding Modes of the Glioma Targeting NFL-TBS.40–63 Peptide on Tubulin

Laurin, Yoann, Savarin, Philippe, Robert, Charles H., Takahashi, Masayuki, Eyer, Joel, Prevost, Chantal, Sacquin-Mora, Sophie

Journal:

Year:

2015

Language:

english

File:

PDF, 6.49 MB

english, 2015

12

Determinants of neuroglobin plasticity highlighted by joint coarse-grained simulations and high pressure crystallography

Colloc’h, Nathalie, Sacquin-Mora, Sophie, Avella, Giovanna, Dhaussy, Anne-Claire, Prangé, Thierry, Vallone, Beatrice, Girard, Eric

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.77 MB

english, 2017

13

Coarse-grain simulations on NMR conformational ensembles highlight functional residues in proteins

Sacquin-Mora, Sophie

Journal:

Journal of The Royal Society Interface

Year:

2019

File:

PDF, 1.32 MB

2019

14

Nanoscopic liquid bridges exposed to a torsional strain

Sacquin-Mora, Sophie, Fuchs, Alain H., Schoen, Martin

Journal:

Physical Review E

Year:

2003

Language:

english

File:

PDF, 195 KB

english, 2003

15

Protein interaction energy landscapes are shaped by functional and also non-functional partners

Schweke, Hugo, Mucchielli, Marie-Hélène, Sacquin-Mora, Sophie, Bei, Wanying, Lopes, Anne

Journal:

Journal of Molecular Biology

Year:

2020

File:

PDF, 7.87 MB

2020

16

Investigating the Local Flexibility of Functional Residues in Hemoproteins

Sacquin-Mora, Sophie, Lavery, Richard

Journal:

Biophysical Journal

Year:

2006

Language:

english

File:

PDF, 493 KB

english, 2006

17

The weak, fluctuating, dipole moment of membrane-bound hydrogenase from Aquifex aeolicus accounts for its adaptability to charged electrodes

Oteri, Francesco, Ciaccafava, Alexandre, Poulpiquet, Anne de, Baaden, Marc, Lojou, Elisabeth, Sacquin-Mora, Sophie

Journal:

Physical Chemistry Chemical Physics

Year:

2014

Language:

english

File:

PDF, 2.68 MB

english, 2014

18

Joint Evolutionary Trees: A Large-Scale Method To Predict Protein Interfaces Based on Sequence Sampling

Engelen, Stefan, Trojan, Ladislas A., Sacquin-Mora, Sophie, Lavery, Richard, Carbone, Alessandra, Levitt, Michael

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.73 MB

english, 2009

19

Enzyme Closure and Nucleotide Binding Structurally Lock Guanylate Kinase

Delalande, Olivier, Sacquin-Mora, Sophie, Baaden, Marc

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 1.16 MB

english, 2011

20

Frontier Residues Lining Globin Internal Cavities Present Specific Mechanical Properties

Bocahut, Anthony, Bernad, Sophie, Sebban, Pierre, Sacquin-Mora, Sophie

Journal:

Journal of the American Chemical Society

Year:

2011

Language:

english

File:

PDF, 1.09 MB

english, 2011

21

Relating the Diffusion of Small Ligands in Human Neuroglobin to Its Structural and Mechanical Properties

Bocahut, Anthony, Bernad, Sophie, Sebban, Pierre, Sacquin-Mora, Sophie

Journal:

Journal of Physical Chemistry B

Year:

2009

Language:

english

File:

PDF, 5.09 MB

english, 2009

22

Conformational stability adaptation of a double-stranded RNA binding domain to transfer RNA ligand

Bou-nader, Charles, Pecqueur, Ludovic, Barraud, Pierre, Fontecave, Marc, Tisne, Carine, Sacquin-Mora, Sophie, Hamdane, Djemel

Journal:

Year:

2019

File:

PDF, 1.04 MB

2019

23

The Closure Mechanism Of M. Tuberculosis Guanylate Kinase Relates Structural Fluctuations To Enzymatic Function

Delalande, Olivier, Sacquin-Mora, Sophie, Baaden, Marc

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 82 KB

english, 2009

24

Great Interactions: Binding Incorrect Partners to Learn about Protein Recognition and Function

Vamparys, Lydie, Laurent, Benoist, Carbone, Alessandra, Sacquin-Mora, Sophie

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 66 KB

english, 2017

25

Protein mechanics: a route from structure to function

Richard Lavery, Sophie Sacquin-Mora

Journal:

Journal of Biosciences

Year:

2007

Language:

english

File:

PDF, 405 KB

english, 2007

26

Protein-Protein Interactions in a Crowded Environment: An Analysis via Cross-Docking Simulations and Evolutionary Information

Lopes, Anne, Sacquin-Mora, Sophie, Dimitrova, Viktoriya, Laine, Elodie, Ponty, Yann, Carbone, Alessandra, Kann, Maricel

Journal:

PLoS Computational Biology

Year:

2013

Language:

english

File:

PDF, 5.27 MB

english, 2013

27

Coarse-grain simulations on NMR conformational ensembles highlight functional residues in proteins

Sacquin-Mora, Sophie

Journal:

Journal of The Royal Society Interface

Year:

2019

Language:

english

File:

PDF, 1.32 MB

english, 2019

28

Locating the active sites of enzymes using mechanical properties

Sophie Sacquin-Mora, Émilie Laforet, Richard Lavery

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 645 KB

english, 2007

29

Charge Recombination Kinetics and Protein Dynamics in Wild Type and Carotenoid-less Bacterial Reaction Centers: Studies in Trehalose Glasses

Francia, Francesco, Malferrari, Marco, Sacquin-Mora, Sophie, Venturoli, Giovanni

Journal:

Journal of Physical Chemistry B

Year:

2009

Language:

english

File:

PDF, 1.96 MB

english, 2009

30

Multiscale Simulations Give Insight into the Hydrogen In and Out Pathways of [NiFe]-Hydrogenases from Aquifex aeolicus and Desulfovibrio fructosovorans

Oteri, Francesco, Baaden, Marc, Lojou, Elisabeth, Sacquin-Mora, Sophie

Journal:

Journal of Physical Chemistry B

Year:

2014

Language:

english

File:

PDF, 5.17 MB

english, 2014

31

Mechanical variations in proteins with large-scale motions highlight the formation of structural locks

Sacquin-Mora, Sophie

Journal:

Journal of Structural Biology

Year:

2018

Language:

english

File:

PDF, 5.03 MB

english, 2018

32

Torsion-induced phase transitions in fluids confined between chemically decorated substrates

Sacquin-Mora, Sophie, Fuchs, Alain H., Schoen, Martin

Journal:

The Journal of Chemical Physics

Year:

2004

Language:

english

File:

PDF, 522 KB

english, 2004

33

Motions and mechanics: investigating conformational transitions in multi-domain proteins with coarse-grain simulations

Sacquin-Mora, Sophie

Journal:

Molecular Simulation

Year:

2014

Language:

english

File:

PDF, 812 KB

english, 2014

34

Great interactions: How binding incorrect partners can teach us about protein recognition and function

Vamparys, Lydie, Laurent, Benoist, Carbone, Alessandra, Sacquin-Mora, Sophie

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2016

Language:

english

File:

PDF, 824 KB

english, 2016

35

Implicit Modeling of the Impact of Adsorption on Solid Surfaces for Protein Mechanics and Activity with a Coarse-Grained Representation

Bourassin, Nicolas, Baaden, Marc, Lojou, Elisabeth, Sacquin-Mora, Sophie

Journal:

Journal of Physical Chemistry B

Year:

2020

File:

PDF, 4.21 MB

2020

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